Question: Recommend Easy To Use Microarray Clustering Software
1
gravatar for István Albert
11.1 years ago by
István Albert ♦♦ 310
University Park
István Albert ♦♦ 310 wrote:

Feel free to post your favorite clustering tool.

microarray clustering • 1.4k views
ADD COMMENTlink modified 11.1 years ago by Jane ♦♦ 0 • written 11.1 years ago by István Albert ♦♦ 310
2
gravatar for István Albert
11.1 years ago by
István Albert ♦♦ 310
University Park
István Albert ♦♦ 310 wrote:

One of my favorites is the MEV micro-array data analysis tool. It is simple to use and it has a very large number of features.

Works well for any type of data. You can also load into it data from a file that is in a simple text format:

GENE1, value1, value2
GENE2, value1, value2

Feel free to post your favorite clustering tool.

ADD COMMENTlink written 11.1 years ago by István Albert ♦♦ 310
1
gravatar for Zhenhai Zhang
11.0 years ago by
502 Wartik Lab, Penn State Univ
Zhenhai Zhang50 wrote:

I would recommend a combination of cluster and treeview.

pretty powerful!

ADD COMMENTlink written 11.0 years ago by Zhenhai Zhang50
1
gravatar for Alex
10.7 years ago by
Alex10
Alex10 wrote:

Possibly related: http://mmc.gnets.ncsu.edu/

ADD COMMENTlink written 10.7 years ago by Alex10
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