User: Alex Reynolds

gravatar for Alex Reynolds
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Last seen:
8 years, 11 months ago
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10 years, 10 months ago
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2*@lvh.me

Posts by Alex Reynolds

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Answer: A: How Do I Convert From Bed Format To Gff Format?
... Here's a Perl script I wrote if you wanted to do something local. There's some code in there for translating yeast chromosome names that can be removed, if not needed. I also used a Site feature in the GFF file as the region ID, which might also need tweaking, depending on what features you're int ...
written 10.8 years ago by Alex Reynolds30 • updated 10.8 years ago by Mohammed Islaih20
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Tips On Compiling And Using Meme 4.3 With A Sun Grid Engine Computation Cluster
... Has anyone compiled and used MEME 4.x for use in a parallel computation environment, based upon operation with a Sun Grid Engine (SGE) cluster? I can compile the suite and its tests pass. However, when I attempt to use the -p n option, to specify n computation nodes, I get several error messages: ...
motif meme sge compilation written 10.8 years ago by Alex Reynolds30 • updated 10.8 years ago by Mohammed Islaih20

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